Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Tubb3Q9ERD7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Gm20426-201ENSMUST00000173657 440 ntBASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Gm43947-201ENSMUST00000203019 959 ntBASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Gm8959-201ENSMUST00000213150 571 ntBASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Spcs1-203ENSMUST00000226374 592 ntBASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tubb3Q9ERD7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Gm14263-201ENSMUST00000117955 746 ntBASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Gm12501-201ENSMUST00000119163 529 ntBASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Gm11450-201ENSMUST00000121144 333 ntBASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Mir3547-201ENSMUST00000175461 88 ntBASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Gm6114-201ENSMUST00000182472 968 ntBASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Gm270-201ENSMUST00000223010 976 ntBASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tubb3Q9ERD7 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms