Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm23200-201ENSMUST00000104379 132 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm15808-201ENSMUST00000119046 604 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm8199-201ENSMUST00000121323 823 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm27552-201ENSMUST00000183351 62 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm27844-201ENSMUST00000183613 62 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne8Q9DC53 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm43417-201ENSMUST00000201586 5207 ntBASIC12□□□□□ -0.49
Cpne8Q9DC53 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cpne8Q9DC53 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12□□□□□ -0.49
Cpne8Q9DC53 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm2260-201ENSMUST00000184965 657 ntBASIC12□□□□□ -0.49
Cpne8Q9DC53 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm4857-201ENSMUST00000192718 785 ntBASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm43438-201ENSMUST00000198133 379 ntBASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cpne8Q9DC53 Gm37580-201ENSMUST00000192408 2800 ntBASIC12□□□□□ -0.49
Cpne8Q9DC53 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cpne8Q9DC53 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne8Q9DC53 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms