Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm2260-201ENSMUST00000184965 657 ntBASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp4bQ9D8B3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm13916-201ENSMUST00000117368 628 ntBASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm44008-201ENSMUST00000204345 412 ntBASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm10254-201ENSMUST00000052888 867 ntBASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm18806-201ENSMUST00000207607 1775 ntBASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Chmp4bQ9D8B3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Gm15808-201ENSMUST00000119046 604 ntBASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Gm18734-201ENSMUST00000172937 808 ntBASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Gm29499-201ENSMUST00000189151 486 ntBASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Gm28329-201ENSMUST00000191208 689 ntBASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Gm29171-201ENSMUST00000191397 486 ntBASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp4bQ9D8B3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp4bQ9D8B3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.55□□□□□ -0.08
Chmp4bQ9D8B3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4bQ9D8B3 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4bQ9D8B3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4bQ9D8B3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms