Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Stag1Q9D3E6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Gm14071-201ENSMUST00000117817 509 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Gm13117-201ENSMUST00000120894 691 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Gm5298-201ENSMUST00000201122 892 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Gm18561-201ENSMUST00000206027 804 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Stag1Q9D3E6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Stag1Q9D3E6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Stag1Q9D3E6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
Stag1Q9D3E6 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.77□□□□□ -0.2
Stag1Q9D3E6 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Stag1Q9D3E6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Stag1Q9D3E6 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm11500-201ENSMUST00000118237 601 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm13422-201ENSMUST00000118834 504 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm16219-201ENSMUST00000120096 274 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm25492-201ENSMUST00000157383 129 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm42816-201ENSMUST00000198433 325 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm45120-201ENSMUST00000208880 408 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.77□□□□□ -0.21
Stag1Q9D3E6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Stag1Q9D3E6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Stag1Q9D3E6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Stag1Q9D3E6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Stag1Q9D3E6 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms