Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Gm3508-201ENSMUST00000186012 792 ntBASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gm11660-201ENSMUST00000120955 412 ntBASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gm9550-201ENSMUST00000161130 862 ntBASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gm45118-201ENSMUST00000208928 825 ntBASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf135Q9CWS1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf135Q9CWS1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Rnf135Q9CWS1 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf135Q9CWS1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm28937-201ENSMUST00000185413 695 ntBASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm29400-201ENSMUST00000187208 695 ntBASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm28662-201ENSMUST00000188446 695 ntBASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm28251-201ENSMUST00000188835 695 ntBASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm37318-201ENSMUST00000194325 695 ntBASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm38017-201ENSMUST00000194768 695 ntBASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm7003-201ENSMUST00000195089 312 ntBASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm37287-201ENSMUST00000195449 695 ntBASIC12.02□□□□□ -0.49
Rnf135Q9CWS1 Gm37793-201ENSMUST00000195548 695 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms