Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Gm37489-201ENSMUST00000191883 159 ntBASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Gm44364-201ENSMUST00000198368 141 ntBASIC11.35□□□□□ -0.59
Trim8Q99PJ2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Gm4607-201ENSMUST00000206649 577 ntBASIC11.35□□□□□ -0.59
Trim8Q99PJ2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Gm7046-201ENSMUST00000221351 977 ntBASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim8Q99PJ2 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gm23270-201ENSMUST00000104055 131 ntBASIC11.34□□□□□ -0.59
Trim8Q99PJ2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Cts7-204ENSMUST00000225321 1257 ntBASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.34□□□□□ -0.59
Trim8Q99PJ2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim8Q99PJ2 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.33□□□□□ -0.59
Trim8Q99PJ2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trim8Q99PJ2 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trim8Q99PJ2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Gm2991-201ENSMUST00000173338 480 ntBASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Gm7584-201ENSMUST00000175829 940 ntBASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Gm30285-201ENSMUST00000214614 422 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms