Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.26□□□□□ -0.13
RtcbQ99LF4 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm6170-201ENSMUST00000187672 1388 ntBASIC14.25□□□□□ -0.13
RtcbQ99LF4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm22937-201ENSMUST00000103954 131 ntBASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm13204-201ENSMUST00000120110 821 ntBASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm14052-201ENSMUST00000121434 1031 ntBASIC14.25□□□□□ -0.13
RtcbQ99LF4 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm43854-201ENSMUST00000200418 394 ntBASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.25□□□□□ -0.13
RtcbQ99LF4 BC080696-201ENSMUST00000202858 1218 ntBASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.25□□□□□ -0.13
RtcbQ99LF4 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RtcbQ99LF4 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.24□□□□□ -0.13
RtcbQ99LF4 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gm23745-201ENSMUST00000104230 125 ntBASIC14.24□□□□□ -0.13
RtcbQ99LF4 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gm9133-201ENSMUST00000118289 540 ntBASIC14.24□□□□□ -0.13
RtcbQ99LF4 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gm23675-201ENSMUST00000157311 125 ntBASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gm25343-201ENSMUST00000157460 107 ntBASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.24□□□□□ -0.13
RtcbQ99LF4 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gm2448-201ENSMUST00000207080 559 ntBASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gm45527-201ENSMUST00000211052 774 ntBASIC14.24□□□□□ -0.13
RtcbQ99LF4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RtcbQ99LF4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RtcbQ99LF4 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RtcbQ99LF4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RtcbQ99LF4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RtcbQ99LF4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.23□□□□□ -0.13
RtcbQ99LF4 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms