Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Gm23251-201ENSMUST00000103773 110 ntBASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Gm11331-201ENSMUST00000119764 288 ntBASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Gm10254-201ENSMUST00000052888 867 ntBASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdha3Q91Y16 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm13809-201ENSMUST00000117921 597 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm29499-201ENSMUST00000189151 486 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm28329-201ENSMUST00000191208 689 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm29171-201ENSMUST00000191397 486 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms