Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Gm23272-201ENSMUST00000104053 129 ntBASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Gm25880-201ENSMUST00000104331 132 ntBASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Gm12628-201ENSMUST00000122193 382 ntBASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Gm8531-201ENSMUST00000188319 893 ntBASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Gm5298-201ENSMUST00000201122 892 ntBASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Gm23680-201ENSMUST00000083162 164 ntBASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm15615-201ENSMUST00000118876 198 ntBASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm8459-201ENSMUST00000162504 760 ntBASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm9192-201ENSMUST00000183221 985 ntBASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm44158-201ENSMUST00000203881 505 ntBASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb18Q91Y02 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Gm12036-201ENSMUST00000120008 530 ntBASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Gm10807-201ENSMUST00000177134 795 ntBASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.11□□□□□ -0.47
Pcdhb18Q91Y02 Gm42599-201ENSMUST00000201308 469 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms