Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm13792-201ENSMUST00000121350 423 ntBASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm19030-201ENSMUST00000194947 552 ntBASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb3Q91XZ7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm45885-202ENSMUST00000211520 1383 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm22121-201ENSMUST00000175148 54 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm28011-201ENSMUST00000184097 175 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Mir8109-201ENSMUST00000184375 117 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 AU022133-201ENSMUST00000200601 873 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm45930-201ENSMUST00000221330 292 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 AC134254.4-201ENSMUST00000223086 370 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb3Q91XZ7 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm15161-201ENSMUST00000117340 387 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm11591-201ENSMUST00000120063 702 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms