Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm22495-201ENSMUST00000104492 126 ntBASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm8659-201ENSMUST00000120024 1084 ntBASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm22344-201ENSMUST00000122642 278 ntBASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm22388-201ENSMUST00000158194 248 ntBASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm7211-201ENSMUST00000172692 1118 ntBASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm29067-201ENSMUST00000190821 470 ntBASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm38007-201ENSMUST00000192187 313 ntBASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx54Q8K4L0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx54Q8K4L0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx54Q8K4L0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx54Q8K4L0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.08■□□□□ 0.01
Ddx54Q8K4L0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx54Q8K4L0 Gm38089-201ENSMUST00000193585 1514 ntBASIC15.08■□□□□ 0.01
Ddx54Q8K4L0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx54Q8K4L0 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Defa-ps17-201ENSMUST00000121849 171 ntBASIC15.08■□□□□ 0
Ddx54Q8K4L0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Gm4775-201ENSMUST00000169588 402 ntBASIC15.08■□□□□ 0
Ddx54Q8K4L0 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Gm43811-201ENSMUST00000202862 695 ntBASIC15.08■□□□□ 0
Ddx54Q8K4L0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 AC154407.1-201ENSMUST00000226777 526 ntBASIC15.08■□□□□ 0
Ddx54Q8K4L0 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ddx54Q8K4L0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx54Q8K4L0 Gm5740-201ENSMUST00000211003 1857 ntBASIC15.08■□□□□ 0
Ddx54Q8K4L0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms