Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Mir5120-201ENSMUST00000175020 78 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Mir7070-201ENSMUST00000183657 86 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm28937-201ENSMUST00000185413 695 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm29400-201ENSMUST00000187208 695 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm28662-201ENSMUST00000188446 695 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm28251-201ENSMUST00000188835 695 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm37318-201ENSMUST00000194325 695 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm38017-201ENSMUST00000194768 695 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm37287-201ENSMUST00000195449 695 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm37793-201ENSMUST00000195548 695 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm45575-201ENSMUST00000210283 548 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfwd3Q8CIK8 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Rfwd3Q8CIK8 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.9□□□□□ -0.67
Rfwd3Q8CIK8 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rfwd3Q8CIK8 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rfwd3Q8CIK8 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rfwd3Q8CIK8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rfwd3Q8CIK8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Gm8199-201ENSMUST00000121323 823 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Gm38314-201ENSMUST00000195709 625 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Gm6867-201ENSMUST00000219165 425 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 190.5 ms