Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Gm15610-201ENSMUST00000120584 195 ntBASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Gm11960-201ENSMUST00000122068 925 ntBASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Gm6439-201ENSMUST00000199849 862 ntBASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm16570-201ENSMUST00000161951 436 ntBASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lrif1Q8CDD9 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm14130-201ENSMUST00000118417 987 ntBASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm14999-201ENSMUST00000121039 624 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms