Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gm23251-201ENSMUST00000103773 110 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gm11511-201ENSMUST00000118146 540 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gm8343-201ENSMUST00000182705 994 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gm3332-201ENSMUST00000189337 928 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gm29787-201ENSMUST00000222129 849 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.23□□□□□ -0.61
SynpoQ8CC35 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynpoQ8CC35 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.22□□□□□ -0.61
SynpoQ8CC35 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.22□□□□□ -0.61
SynpoQ8CC35 Gm13045-201ENSMUST00000119019 712 ntBASIC11.22□□□□□ -0.61
SynpoQ8CC35 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.22□□□□□ -0.61
SynpoQ8CC35 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynpoQ8CC35 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms