Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gm16505-201ENSMUST00000179981 232 ntBASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gm42599-201ENSMUST00000201308 469 ntBASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gm17812-201ENSMUST00000204935 318 ntBASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gm45433-201ENSMUST00000209386 247 ntBASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Gm14208-201ENSMUST00000119645 678 ntBASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Gm14277-201ENSMUST00000121195 360 ntBASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Gm8385-201ENSMUST00000058999 643 ntBASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trerf1Q8BXJ2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 BC043934-202ENSMUST00000185694 2356 ntBASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Gm4607-201ENSMUST00000206649 577 ntBASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trerf1Q8BXJ2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms