Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm18001-201ENSMUST00000212023 688 ntBASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Gm13700-201ENSMUST00000118624 1128 ntBASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Gm12986-201ENSMUST00000119037 967 ntBASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Gm44605-201ENSMUST00000206892 949 ntBASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Gm42815-201ENSMUST00000198787 1470 ntBASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col16a1Q8BLX7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Gm5944-201ENSMUST00000118182 1001 ntBASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Gm26119-201ENSMUST00000175601 104 ntBASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Gm45310-201ENSMUST00000210436 275 ntBASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 AC158986.2-201ENSMUST00000227487 618 ntBASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Gm6478-201ENSMUST00000099450 742 ntBASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Gm38192-201ENSMUST00000194364 1847 ntBASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Gm44740-201ENSMUST00000205603 1614 ntBASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.91□□□□□ -0.02
Col16a1Q8BLX7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Mir1249-201ENSMUST00000116791 98 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gm6758-201ENSMUST00000119643 1055 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gm12745-201ENSMUST00000121767 214 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gm6352-201ENSMUST00000203583 1134 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms