Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Gm26134-201ENSMUST00000178484 110 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Gm37981-201ENSMUST00000194280 535 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Gm5100-201ENSMUST00000195631 589 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Gm5451-201ENSMUST00000080545 579 ntBASIC12.68□□□□□ -0.38
Ush1gQ80T11 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.68□□□□□ -0.38
Ush1gQ80T11 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Gm25766-201ENSMUST00000104101 131 ntBASIC12.67□□□□□ -0.38
Ush1gQ80T11 Gm11783-201ENSMUST00000119549 885 ntBASIC12.67□□□□□ -0.38
Ush1gQ80T11 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.67□□□□□ -0.38
Ush1gQ80T11 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Gm18367-201ENSMUST00000176139 600 ntBASIC12.67□□□□□ -0.38
Ush1gQ80T11 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Gm9139-201ENSMUST00000218817 700 ntBASIC12.67□□□□□ -0.38
Ush1gQ80T11 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ush1gQ80T11 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.66□□□□□ -0.38
Ush1gQ80T11 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.66□□□□□ -0.38
Ush1gQ80T11 Gm9089-201ENSMUST00000122027 526 ntBASIC12.66□□□□□ -0.38
Ush1gQ80T11 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.66□□□□□ -0.38
Ush1gQ80T11 Gm38151-201ENSMUST00000195085 289 ntBASIC12.66□□□□□ -0.38
Ush1gQ80T11 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.66□□□□□ -0.38
Ush1gQ80T11 Gm3619-201ENSMUST00000219947 775 ntBASIC12.66□□□□□ -0.38
Ush1gQ80T11 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms