Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm15615-201ENSMUST00000118876 198 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm10169-201ENSMUST00000121822 348 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm3726-201ENSMUST00000203110 785 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm18460-201ENSMUST00000208088 464 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox11Q7M6Y2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm9089-201ENSMUST00000122027 526 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm8451-201ENSMUST00000170338 447 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Mir6923-201ENSMUST00000184592 72 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm4034-201ENSMUST00000187674 480 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm8574-201ENSMUST00000203207 924 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm45113-201ENSMUST00000207518 165 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm7536-201ENSMUST00000077389 444 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm5453-201ENSMUST00000080866 447 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox11Q7M6Y2 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.73□□□□□ -0.53
Sox11Q7M6Y2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox11Q7M6Y2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox11Q7M6Y2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox11Q7M6Y2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms