Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm11475-201ENSMUST00000118482 476 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm37782-201ENSMUST00000194879 678 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 AC102569.1-201ENSMUST00000221563 685 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm42970-201ENSMUST00000196407 1352 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm1826-201ENSMUST00000118646 1162 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm11952-201ENSMUST00000121172 821 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm7238-201ENSMUST00000206467 973 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd4Q6PDQ2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Gm15136-201ENSMUST00000120552 533 ntBASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Gm5210-201ENSMUST00000182150 1010 ntBASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Platr10-202ENSMUST00000191479 818 ntBASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Gm7589-201ENSMUST00000085631 534 ntBASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd4Q6PDQ2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms