Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Scn9aQ62205 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Scn9aQ62205 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC13.4□□□□□ -0.27
Scn9aQ62205 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Scn9aQ62205 Nsmce2-203ENSMUST00000227173 1122 ntBASIC13.4□□□□□ -0.27
Scn9aQ62205 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Scn9aQ62205 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC13.39□□□□□ -0.27
Scn9aQ62205 Gm26174-201ENSMUST00000158415 219 ntBASIC13.39□□□□□ -0.27
Scn9aQ62205 Gm5808-201ENSMUST00000178090 357 ntBASIC13.39□□□□□ -0.27
Scn9aQ62205 Gm43811-201ENSMUST00000202862 695 ntBASIC13.39□□□□□ -0.27
Scn9aQ62205 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Btrc-209ENSMUST00000224478 2194 ntBASIC13.39□□□□□ -0.27
Scn9aQ62205 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Scn9aQ62205 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Scn9aQ62205 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Scn9aQ62205 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Scn9aQ62205 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.39□□□□□ -0.27
Scn9aQ62205 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn9aQ62205 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.39□□□□□ -0.27
Scn9aQ62205 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm24933-201ENSMUST00000103762 110 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm23252-201ENSMUST00000103776 110 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm15815-201ENSMUST00000120569 255 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm26443-201ENSMUST00000179610 110 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.38□□□□□ -0.27
Scn9aQ62205 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Scn9aQ62205 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scn9aQ62205 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Scn9aQ62205 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm14006-201ENSMUST00000122132 981 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm25394-201ENSMUST00000157338 133 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm17944-201ENSMUST00000186351 643 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC13.38□□□□□ -0.27
Scn9aQ62205 AC107752.1-201ENSMUST00000219362 469 ntBASIC13.38□□□□□ -0.27
Scn9aQ62205 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC13.38□□□□□ -0.27
Scn9aQ62205 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Scn9aQ62205 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn9aQ62205 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.37□□□□□ -0.27
Scn9aQ62205 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Gm13192-201ENSMUST00000101199 208 ntBASIC13.37□□□□□ -0.27
Scn9aQ62205 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Gm10443-201ENSMUST00000119024 210 ntBASIC13.37□□□□□ -0.27
Scn9aQ62205 Gm12745-201ENSMUST00000121767 214 ntBASIC13.37□□□□□ -0.27
Scn9aQ62205 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Gm26875-201ENSMUST00000181006 950 ntBASIC13.37□□□□□ -0.27
Scn9aQ62205 Zcwpw2-203ENSMUST00000187803 372 ntBASIC13.37□□□□□ -0.27
Scn9aQ62205 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms