Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sox17Q61473 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.8□□□□□ -0.68
Sox17Q61473 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.8□□□□□ -0.68
Sox17Q61473 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.8□□□□□ -0.68
Sox17Q61473 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.8□□□□□ -0.68
Sox17Q61473 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox17Q61473 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox17Q61473 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.79□□□□□ -0.68
Sox17Q61473 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.79□□□□□ -0.68
Sox17Q61473 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Gm22018-201ENSMUST00000104357 131 ntBASIC10.79□□□□□ -0.68
Sox17Q61473 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.79□□□□□ -0.68
Sox17Q61473 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.79□□□□□ -0.68
Sox17Q61473 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.79□□□□□ -0.68
Sox17Q61473 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.79□□□□□ -0.68
Sox17Q61473 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox17Q61473 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox17Q61473 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox17Q61473 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.79□□□□□ -0.68
Sox17Q61473 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox17Q61473 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox17Q61473 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.79□□□□□ -0.68
Sox17Q61473 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox17Q61473 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox17Q61473 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.78□□□□□ -0.68
Sox17Q61473 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.78□□□□□ -0.68
Sox17Q61473 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox17Q61473 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox17Q61473 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sox17Q61473 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox17Q61473 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox17Q61473 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.78□□□□□ -0.68
Sox17Q61473 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Sox17Q61473 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox17Q61473 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.78□□□□□ -0.68
Sox17Q61473 Gm11989-201ENSMUST00000117240 672 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms