Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm18065-201ENSMUST00000221395 526 ntBASIC11.03□□□□□ -0.64
Nr1h4Q60641 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nr1h4Q60641 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nr1h4Q60641 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.02□□□□□ -0.64
Nr1h4Q60641 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nr1h4Q60641 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nr1h4Q60641 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Nr1h4Q60641 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nr1h4Q60641 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Nr1h4Q60641 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nr1h4Q60641 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Nr1h4Q60641 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm23931-201ENSMUST00000103842 109 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm5187-201ENSMUST00000117317 991 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm11660-201ENSMUST00000120955 412 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm15547-201ENSMUST00000122152 333 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.02□□□□□ -0.65
Nr1h4Q60641 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm37489-201ENSMUST00000191883 159 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm4607-201ENSMUST00000206649 577 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm2553-201ENSMUST00000215986 605 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.02□□□□□ -0.65
Nr1h4Q60641 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.02□□□□□ -0.65
Nr1h4Q60641 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.01□□□□□ -0.65
Nr1h4Q60641 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.01□□□□□ -0.65
Nr1h4Q60641 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Lrtm1-203ENSMUST00000224760 3060 ntBASIC11.01□□□□□ -0.65
Nr1h4Q60641 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Gm11793-201ENSMUST00000120433 981 ntBASIC11.01□□□□□ -0.65
Nr1h4Q60641 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms