Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm24066-201ENSMUST00000104515 131 ntBASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Gm13284-201ENSMUST00000121020 547 ntBASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Gm25694-201ENSMUST00000175448 282 ntBASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Gm9192-201ENSMUST00000183221 985 ntBASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Spg11Q3UHA3 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm14021-201ENSMUST00000117683 961 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm15329-201ENSMUST00000121408 155 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm44882-201ENSMUST00000205702 802 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm25154-201ENSMUST00000157123 119 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm15664-201ENSMUST00000160167 184 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm5873-201ENSMUST00000177157 1066 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Elobl-202ENSMUST00000082339 300 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm22341-201ENSMUST00000083775 129 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Klf10-203ENSMUST00000227920 2144 ntBASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Spg11Q3UHA3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm8111-201ENSMUST00000117659 987 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm15476-201ENSMUST00000118247 1191 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm15610-201ENSMUST00000120584 195 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms