Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.46□□□□□ -0.9
Trim63Q38HM4 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm4810-201ENSMUST00000177721 1607 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm9271-201ENSMUST00000185988 2580 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Dgkd-201ENSMUST00000027517 5695 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm12585-201ENSMUST00000117307 290 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm13015-201ENSMUST00000118674 204 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm15703-201ENSMUST00000120250 880 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm6098-201ENSMUST00000180234 330 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm2651-201ENSMUST00000203560 838 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm20553-201ENSMUST00000204205 844 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Gm26315-201ENSMUST00000083890 321 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.45□□□□□ -0.9
Trim63Q38HM4 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim63Q38HM4 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.44□□□□□ -0.9
Trim63Q38HM4 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.44□□□□□ -0.9
Trim63Q38HM4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Gm12428-201ENSMUST00000119844 727 ntBASIC9.44□□□□□ -0.9
Trim63Q38HM4 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms