Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Mir8111-201ENSMUST00000184463 137 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 AC154585.1-201ENSMUST00000218917 997 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 AC141884.2-201ENSMUST00000228811 775 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Gm9701-201ENSMUST00000077976 427 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Gm27177-202ENSMUST00000183514 2703 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Gm3836-201ENSMUST00000211377 1613 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 AC154517.2-201ENSMUST00000220829 2458 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Gm14997-201ENSMUST00000119232 636 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Gm43117-201ENSMUST00000198531 379 ntBASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpm1Q2TV84 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Gm20554-201ENSMUST00000177421 2352 ntBASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Gm45745-201ENSMUST00000211447 1180 ntBASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC16.04■□□□□ 0.16
Trpm1Q2TV84 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Gm15258-201ENSMUST00000153801 741 ntBASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Gm4705-201ENSMUST00000177415 354 ntBASIC16.03■□□□□ 0.16
Trpm1Q2TV84 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC16.03■□□□□ 0.16
Trpm1Q2TV84 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 CT009713.2-201ENSMUST00000225532 1149 ntBASIC16.03■□□□□ 0.16
Trpm1Q2TV84 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms