Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Gm5650-201ENSMUST00000209641 598 ntBASIC12.32□□□□□ -0.44
Col19a1Q0VF58 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Mir1249-201ENSMUST00000116791 98 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm3828-201ENSMUST00000121817 257 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm20493-201ENSMUST00000173706 213 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm27826-201ENSMUST00000175282 255 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm24312-201ENSMUST00000178677 119 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm18552-201ENSMUST00000187425 538 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm19918-201ENSMUST00000194858 400 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm42689-201ENSMUST00000202403 404 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col19a1Q0VF58 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms