Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cdx4Q07424 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx4Q07424 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx4Q07424 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx4Q07424 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx4Q07424 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx4Q07424 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC8.98□□□□□ -0.97
Cdx4Q07424 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm2128-201ENSMUST00000108009 2560 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm23949-201ENSMUST00000104027 127 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm12501-201ENSMUST00000119163 529 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm5616-201ENSMUST00000165252 384 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm18734-201ENSMUST00000172937 808 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm8741-201ENSMUST00000174736 384 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm8956-201ENSMUST00000203939 825 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm8959-201ENSMUST00000213150 571 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 AC123619.2-202ENSMUST00000225097 1568 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC8.97□□□□□ -0.97
Cdx4Q07424 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cdx4Q07424 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cdx4Q07424 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cdx4Q07424 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cdx4Q07424 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cdx4Q07424 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cdx4Q07424 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cdx4Q07424 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cdx4Q07424 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cdx4Q07424 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cdx4Q07424 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cdx4Q07424 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cdx4Q07424 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cdx4Q07424 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC8.96□□□□□ -0.98
Cdx4Q07424 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Cdx4Q07424 Gm9062-201ENSMUST00000117712 727 ntBASIC8.96□□□□□ -0.98
Cdx4Q07424 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Cdx4Q07424 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cdx4Q07424 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC8.96□□□□□ -0.98
Cdx4Q07424 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Cdx4Q07424 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC8.96□□□□□ -0.98
Cdx4Q07424 Gm27552-201ENSMUST00000183351 62 ntBASIC8.96□□□□□ -0.98
Cdx4Q07424 Gm27844-201ENSMUST00000183613 62 ntBASIC8.96□□□□□ -0.98
Cdx4Q07424 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cdx4Q07424 Gm34767-201ENSMUST00000191813 1062 ntBASIC8.96□□□□□ -0.98
Cdx4Q07424 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cdx4Q07424 Spcs1-203ENSMUST00000226374 592 ntBASIC8.96□□□□□ -0.98
Cdx4Q07424 AC154532.1-201ENSMUST00000227860 965 ntBASIC8.96□□□□□ -0.98
Cdx4Q07424 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cdx4Q07424 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms