Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.71□□□□□ -0.86
Npas1P97459 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.71□□□□□ -0.86
Npas1P97459 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Npas1P97459 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.7□□□□□ -0.86
Npas1P97459 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.7□□□□□ -0.86
Npas1P97459 Gm15806-201ENSMUST00000120696 955 ntBASIC9.7□□□□□ -0.86
Npas1P97459 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.7□□□□□ -0.86
Npas1P97459 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Gm9002-201ENSMUST00000178437 499 ntBASIC9.7□□□□□ -0.86
Npas1P97459 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.7□□□□□ -0.86
Npas1P97459 Gm29649-201ENSMUST00000185649 419 ntBASIC9.7□□□□□ -0.86
Npas1P97459 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.7□□□□□ -0.86
Npas1P97459 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.7□□□□□ -0.86
Npas1P97459 Gm5781-201ENSMUST00000219792 443 ntBASIC9.7□□□□□ -0.86
Npas1P97459 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.7□□□□□ -0.86
Npas1P97459 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.7□□□□□ -0.86
Npas1P97459 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.7□□□□□ -0.86
Npas1P97459 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Npas1P97459 Gm17980-201ENSMUST00000217977 2349 ntBASIC9.7□□□□□ -0.86
Npas1P97459 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Npas1P97459 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Npas1P97459 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Npas1P97459 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Gm24934-201ENSMUST00000103764 111 ntBASIC9.69□□□□□ -0.86
Npas1P97459 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Gm13875-201ENSMUST00000120162 282 ntBASIC9.69□□□□□ -0.86
Npas1P97459 Gm14999-201ENSMUST00000121039 624 ntBASIC9.69□□□□□ -0.86
Npas1P97459 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.69□□□□□ -0.86
Npas1P97459 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.69□□□□□ -0.86
Npas1P97459 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.69□□□□□ -0.86
Npas1P97459 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.69□□□□□ -0.86
Npas1P97459 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Gm29127-201ENSMUST00000188304 517 ntBASIC9.69□□□□□ -0.86
Npas1P97459 Erich3-203ENSMUST00000189969 3460 ntBASIC9.69□□□□□ -0.86
Npas1P97459 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.69□□□□□ -0.86
Npas1P97459 Gm42693-201ENSMUST00000196779 631 ntBASIC9.69□□□□□ -0.86
Npas1P97459 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.69□□□□□ -0.86
Npas1P97459 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.69□□□□□ -0.86
Npas1P97459 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.69□□□□□ -0.86
Npas1P97459 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Npas1P97459 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Npas1P97459 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms