Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm42430-201ENSMUST00000197209 616 ntBASIC14.47□□□□□ -0.09
Nkx2-3P97334 Gm43778-201ENSMUST00000199438 199 ntBASIC14.47□□□□□ -0.09
Nkx2-3P97334 Gm43506-201ENSMUST00000200675 753 ntBASIC14.47□□□□□ -0.09
Nkx2-3P97334 CT010431.1-201ENSMUST00000221249 1080 ntBASIC14.47□□□□□ -0.09
Nkx2-3P97334 AC126799.1-201ENSMUST00000221976 246 ntBASIC14.47□□□□□ -0.09
Nkx2-3P97334 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.47□□□□□ -0.09
Nkx2-3P97334 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nkx2-3P97334 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Gm25545-201ENSMUST00000122673 323 ntBASIC14.46□□□□□ -0.09
Nkx2-3P97334 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Gm37852-201ENSMUST00000193027 350 ntBASIC14.46□□□□□ -0.09
Nkx2-3P97334 Gm34379-201ENSMUST00000195036 290 ntBASIC14.46□□□□□ -0.09
Nkx2-3P97334 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Gm35960-201ENSMUST00000202712 767 ntBASIC14.46□□□□□ -0.09
Nkx2-3P97334 Gm8255-201ENSMUST00000218693 305 ntBASIC14.46□□□□□ -0.09
Nkx2-3P97334 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.46□□□□□ -0.09
Nkx2-3P97334 Capsl-202ENSMUST00000226688 739 ntBASIC14.46□□□□□ -0.09
Nkx2-3P97334 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-3P97334 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.46□□□□□ -0.1
Nkx2-3P97334 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-3P97334 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.45□□□□□ -0.1
Nkx2-3P97334 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Mir453-201ENSMUST00000104732 82 ntBASIC14.45□□□□□ -0.1
Nkx2-3P97334 Gm14165-201ENSMUST00000121456 952 ntBASIC14.45□□□□□ -0.1
Nkx2-3P97334 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Mir6941-201ENSMUST00000184711 59 ntBASIC14.45□□□□□ -0.1
Nkx2-3P97334 Gm5621-201ENSMUST00000187303 640 ntBASIC14.45□□□□□ -0.1
Nkx2-3P97334 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Gm5870-201ENSMUST00000196461 282 ntBASIC14.45□□□□□ -0.1
Nkx2-3P97334 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.45□□□□□ -0.1
Nkx2-3P97334 AC122024.3-201ENSMUST00000217719 294 ntBASIC14.45□□□□□ -0.1
Nkx2-3P97334 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms