Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm15770-201ENSMUST00000117498 584 ntBASIC6.57□□□□□ -1.36
Rps28P62858 Gm15172-201ENSMUST00000118945 1046 ntBASIC6.57□□□□□ -1.36
Rps28P62858 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC6.57□□□□□ -1.36
Rps28P62858 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Gm8597-201ENSMUST00000191525 1109 ntBASIC6.57□□□□□ -1.36
Rps28P62858 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC6.57□□□□□ -1.36
Rps28P62858 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
Rps28P62858 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Rps28P62858 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Rps28P62858 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Rps28P62858 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Gm18640-201ENSMUST00000209777 2165 ntBASIC6.57□□□□□ -1.36
Rps28P62858 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Aldh18a1-201ENSMUST00000025979 3527 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 BC026762-201ENSMUST00000206555 2503 ntBASIC6.56□□□□□ -1.36
Rps28P62858 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Bgn-201ENSMUST00000033741 2419 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Dpf3-207ENSMUST00000178756 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Zfp873-204ENSMUST00000210325 2360 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Rps28P62858 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC6.56□□□□□ -1.36
Rps28P62858 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC6.56□□□□□ -1.36
Rps28P62858 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC6.56□□□□□ -1.36
Rps28P62858 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC6.56□□□□□ -1.36
Rps28P62858 Cdc34b-202ENSMUST00000188741 1252 ntBASIC6.56□□□□□ -1.36
Rps28P62858 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC6.56□□□□□ -1.36
Rps28P62858 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC6.56□□□□□ -1.36
Rps28P62858 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Rps28P62858 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 AC154621.1-201ENSMUST00000226155 1119 ntBASIC6.56□□□□□ -1.36
Rps28P62858 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Mir497b-201ENSMUST00000093601 125 ntBASIC6.56□□□□□ -1.36
Rps28P62858 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Vmn2r56-201ENSMUST00000163852 2340 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Gm26967-201ENSMUST00000182878 2303 ntBASIC6.56□□□□□ -1.36
Rps28P62858 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC6.56□□□□□ -1.36
Rps28P62858 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Retreg1-206ENSMUST00000228306 1430 ntBASIC6.56□□□□□ -1.36
Rps28P62858 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Mia3-202ENSMUST00000109158 2961 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Add2-201ENSMUST00000032069 3119 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Bcas1-202ENSMUST00000068137 2769 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Rps28P62858 Gm7967-202ENSMUST00000191042 5042 ntBASIC6.56□□□□□ -1.36
Rps28P62858 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rps28P62858 Rab44-201ENSMUST00000087942 4109 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms