Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lbx1P52955 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lbx1P52955 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lbx1P52955 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lbx1P52955 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Lbx1P52955 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lbx1P52955 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Lbx1P52955 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lbx1P52955 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lbx1P52955 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.25□□□□□ -0.61
Lbx1P52955 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Gm16184-201ENSMUST00000162324 573 ntBASIC11.25□□□□□ -0.61
Lbx1P52955 Mir3091-201ENSMUST00000175086 76 ntBASIC11.25□□□□□ -0.61
Lbx1P52955 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lbx1P52955 Gm8197-202ENSMUST00000193422 934 ntBASIC11.25□□□□□ -0.61
Lbx1P52955 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.25□□□□□ -0.61
Lbx1P52955 Gm43966-201ENSMUST00000203301 612 ntBASIC11.25□□□□□ -0.61
Lbx1P52955 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Lbx1P52955 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Lbx1P52955 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.25□□□□□ -0.61
Lbx1P52955 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lbx1P52955 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Lbx1P52955 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Lbx1P52955 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lbx1P52955 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.24□□□□□ -0.61
Lbx1P52955 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC11.24□□□□□ -0.61
Lbx1P52955 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm24140-201ENSMUST00000122773 326 ntBASIC11.24□□□□□ -0.61
Lbx1P52955 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC11.24□□□□□ -0.61
Lbx1P52955 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lbx1P52955 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.24□□□□□ -0.61
Lbx1P52955 Gm24466-201ENSMUST00000179978 109 ntBASIC11.24□□□□□ -0.61
Lbx1P52955 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.24□□□□□ -0.61
Lbx1P52955 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm32102-201ENSMUST00000196885 241 ntBASIC11.24□□□□□ -0.61
Lbx1P52955 Gm7504-201ENSMUST00000201449 424 ntBASIC11.24□□□□□ -0.61
Lbx1P52955 Gm5291-201ENSMUST00000201965 899 ntBASIC11.24□□□□□ -0.61
Lbx1P52955 Gm18124-201ENSMUST00000210695 706 ntBASIC11.24□□□□□ -0.61
Lbx1P52955 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Lbx1P52955 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Lbx1P52955 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.24□□□□□ -0.61
Lbx1P52955 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.24□□□□□ -0.61
Lbx1P52955 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.24□□□□□ -0.61
Lbx1P52955 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lbx1P52955 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.24□□□□□ -0.61
Lbx1P52955 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lbx1P52955 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms