Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atoh1P48985 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atoh1P48985 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atoh1P48985 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atoh1P48985 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atoh1P48985 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atoh1P48985 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atoh1P48985 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Atoh1P48985 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atoh1P48985 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atoh1P48985 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Atoh1P48985 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.03□□□□□ -0.32
Atoh1P48985 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Atoh1P48985 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atoh1P48985 Snord23-201ENSMUST00000116828 109 ntBASIC13.03□□□□□ -0.32
Atoh1P48985 Gm12461-201ENSMUST00000120231 1239 ntBASIC13.03□□□□□ -0.32
Atoh1P48985 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Atoh1P48985 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC13.03□□□□□ -0.32
Atoh1P48985 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.03□□□□□ -0.32
Atoh1P48985 Gm38314-201ENSMUST00000195709 625 ntBASIC13.03□□□□□ -0.32
Atoh1P48985 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC13.03□□□□□ -0.32
Atoh1P48985 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC13.03□□□□□ -0.32
Atoh1P48985 AC164556.1-201ENSMUST00000221318 751 ntBASIC13.03□□□□□ -0.32
Atoh1P48985 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Atoh1P48985 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Atoh1P48985 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Atoh1P48985 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atoh1P48985 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.03□□□□□ -0.32
Atoh1P48985 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atoh1P48985 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atoh1P48985 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.02□□□□□ -0.32
Atoh1P48985 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Atoh1P48985 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atoh1P48985 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.02□□□□□ -0.32
Atoh1P48985 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atoh1P48985 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Atoh1P48985 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.02□□□□□ -0.32
Atoh1P48985 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atoh1P48985 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Atoh1P48985 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Atoh1P48985 Gm23255-201ENSMUST00000102244 110 ntBASIC13.02□□□□□ -0.33
Atoh1P48985 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.02□□□□□ -0.33
Atoh1P48985 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.02□□□□□ -0.33
Atoh1P48985 Gm5529-201ENSMUST00000165691 891 ntBASIC13.02□□□□□ -0.33
Atoh1P48985 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.02□□□□□ -0.33
Atoh1P48985 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.02□□□□□ -0.33
Atoh1P48985 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.02□□□□□ -0.33
Atoh1P48985 Gm8384-201ENSMUST00000190905 704 ntBASIC13.02□□□□□ -0.33
Atoh1P48985 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.02□□□□□ -0.33
Atoh1P48985 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.02□□□□□ -0.33
Atoh1P48985 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.02□□□□□ -0.33
Atoh1P48985 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.02□□□□□ -0.33
Atoh1P48985 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.02□□□□□ -0.33
Atoh1P48985 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atoh1P48985 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.02□□□□□ -0.33
Atoh1P48985 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atoh1P48985 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atoh1P48985 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms