Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-6P43688 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-6P43688 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Nkx2-6P43688 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.96□□□□□ -0.65
Nkx2-6P43688 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.96□□□□□ -0.65
Nkx2-6P43688 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gm8574-201ENSMUST00000203207 924 ntBASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.96□□□□□ -0.65
Nkx2-6P43688 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.96□□□□□ -0.65
Nkx2-6P43688 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-6P43688 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-6P43688 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Gm25766-201ENSMUST00000104101 131 ntBASIC10.95□□□□□ -0.66
Nkx2-6P43688 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Gm16397-201ENSMUST00000122201 494 ntBASIC10.95□□□□□ -0.66
Nkx2-6P43688 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Gm42657-201ENSMUST00000201746 211 ntBASIC10.95□□□□□ -0.66
Nkx2-6P43688 Gm44315-201ENSMUST00000203041 219 ntBASIC10.95□□□□□ -0.66
Nkx2-6P43688 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.95□□□□□ -0.66
Nkx2-6P43688 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-6P43688 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms