Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.97□□□□□ -0.81
Slc6a1P31648 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Slc6a1P31648 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Slc6a1P31648 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.97□□□□□ -0.81
Slc6a1P31648 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.96□□□□□ -0.81
Slc6a1P31648 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Slc6a1P31648 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Slc6a1P31648 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Slc6a1P31648 Gm13315-201ENSMUST00000120376 991 ntBASIC9.96□□□□□ -0.82
Slc6a1P31648 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.96□□□□□ -0.82
Slc6a1P31648 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Slc6a1P31648 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.96□□□□□ -0.82
Slc6a1P31648 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Mospd4-201ENSMUST00000180618 576 ntBASIC9.96□□□□□ -0.82
Slc6a1P31648 Gm27501-201ENSMUST00000183599 107 ntBASIC9.96□□□□□ -0.82
Slc6a1P31648 Mir6420-201ENSMUST00000185032 102 ntBASIC9.96□□□□□ -0.82
Slc6a1P31648 Gm43822-201ENSMUST00000200285 476 ntBASIC9.96□□□□□ -0.82
Slc6a1P31648 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.96□□□□□ -0.82
Slc6a1P31648 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.96□□□□□ -0.82
Slc6a1P31648 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Slc6a1P31648 Olfr582-201ENSMUST00000098212 960 ntBASIC9.96□□□□□ -0.82
Slc6a1P31648 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Slc6a1P31648 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.96□□□□□ -0.82
Slc6a1P31648 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Slc6a1P31648 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Slc6a1P31648 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm11222-201ENSMUST00000119005 738 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm11591-201ENSMUST00000120063 702 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm13342-201ENSMUST00000121055 207 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm14441-201ENSMUST00000121960 540 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm5706-201ENSMUST00000181525 993 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm37489-201ENSMUST00000191883 159 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Olfr284-202ENSMUST00000206647 966 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms