Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm6905-201ENSMUST00000205729 511 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.73□□□□□ -0.69
Cd40lgP27548 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Gm10288-201ENSMUST00000084614 537 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.73□□□□□ -0.69
Cd40lgP27548 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Cd40lgP27548 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.72□□□□□ -0.69
Cd40lgP27548 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.72□□□□□ -0.69
Cd40lgP27548 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm12036-201ENSMUST00000120008 530 ntBASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.72□□□□□ -0.69
Cd40lgP27548 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm26047-201ENSMUST00000157308 113 ntBASIC10.72□□□□□ -0.69
Cd40lgP27548 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm7003-201ENSMUST00000195089 312 ntBASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm26047-202ENSMUST00000198840 115 ntBASIC10.72□□□□□ -0.69
Cd40lgP27548 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.72□□□□□ -0.69
Cd40lgP27548 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.72□□□□□ -0.69
Cd40lgP27548 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cd40lgP27548 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cd40lgP27548 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm12857-201ENSMUST00000117678 592 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm11663-201ENSMUST00000117888 290 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm12164-201ENSMUST00000121695 551 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm23085-201ENSMUST00000157849 293 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms