Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm28937-201ENSMUST00000185413 695 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm29400-201ENSMUST00000187208 695 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm28662-201ENSMUST00000188446 695 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm28251-201ENSMUST00000188835 695 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm37318-201ENSMUST00000194325 695 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm38017-201ENSMUST00000194768 695 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm37287-201ENSMUST00000195449 695 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm37793-201ENSMUST00000195548 695 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm6450-201ENSMUST00000200896 574 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm6082-201ENSMUST00000215204 454 ntBASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf1aP25118 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm15236-201ENSMUST00000117309 379 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm14130-201ENSMUST00000118417 987 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm5616-201ENSMUST00000165252 384 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm17376-201ENSMUST00000166016 84 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm8741-201ENSMUST00000174736 384 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm38117-201ENSMUST00000194653 939 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm18038-201ENSMUST00000197900 485 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm45433-201ENSMUST00000209386 247 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm18065-201ENSMUST00000221395 526 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm26448-201ENSMUST00000082446 203 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Erich3-203ENSMUST00000189969 3460 ntBASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf1aP25118 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms