Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
VimP20152 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.68□□□□□ -0.54
VimP20152 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
VimP20152 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.68□□□□□ -0.54
VimP20152 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.68□□□□□ -0.54
VimP20152 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.68□□□□□ -0.54
VimP20152 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.68□□□□□ -0.54
VimP20152 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.68□□□□□ -0.54
VimP20152 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
VimP20152 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
VimP20152 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.68□□□□□ -0.54
VimP20152 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
VimP20152 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.68□□□□□ -0.54
VimP20152 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.68□□□□□ -0.54
VimP20152 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VimP20152 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.68□□□□□ -0.54
VimP20152 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.68□□□□□ -0.54
VimP20152 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
VimP20152 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.67□□□□□ -0.54
VimP20152 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.67□□□□□ -0.54
VimP20152 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Gm44855-201ENSMUST00000205725 362 ntBASIC11.67□□□□□ -0.54
VimP20152 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.67□□□□□ -0.54
VimP20152 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.67□□□□□ -0.54
VimP20152 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.67□□□□□ -0.54
VimP20152 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VimP20152 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.67□□□□□ -0.54
VimP20152 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.67□□□□□ -0.54
VimP20152 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VimP20152 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
VimP20152 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
VimP20152 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
VimP20152 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.66□□□□□ -0.54
VimP20152 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
VimP20152 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VimP20152 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VimP20152 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VimP20152 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.66□□□□□ -0.54
VimP20152 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.66□□□□□ -0.54
VimP20152 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VimP20152 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms