Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.16□□□□□ -0.62
Fv4P11370 Gm12857-201ENSMUST00000117678 592 ntBASIC11.16□□□□□ -0.62
Fv4P11370 Gm25668-201ENSMUST00000157700 129 ntBASIC11.16□□□□□ -0.62
Fv4P11370 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.16□□□□□ -0.62
Fv4P11370 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.16□□□□□ -0.62
Fv4P11370 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Fv4P11370 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.16□□□□□ -0.62
Fv4P11370 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.16□□□□□ -0.62
Fv4P11370 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Btrc-209ENSMUST00000224478 2194 ntBASIC11.16□□□□□ -0.62
Fv4P11370 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fv4P11370 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fv4P11370 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Fv4P11370 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Gm23949-201ENSMUST00000104027 127 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Gm23596-201ENSMUST00000104304 132 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Fv4P11370 Gm11663-201ENSMUST00000117888 290 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Gm12463-201ENSMUST00000118271 849 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Gm12380-201ENSMUST00000119012 544 ntBASIC11.15□□□□□ -0.62
Fv4P11370 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.15□□□□□ -0.62
Fv4P11370 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.15□□□□□ -0.62
Fv4P11370 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Gm17376-201ENSMUST00000166016 84 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.15□□□□□ -0.62
Fv4P11370 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.15□□□□□ -0.62
Fv4P11370 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Gm5714-201ENSMUST00000197343 566 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Gm44008-201ENSMUST00000204345 412 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Gm44262-201ENSMUST00000204969 372 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.15□□□□□ -0.62
Fv4P11370 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Gm9899-201ENSMUST00000065519 555 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.15□□□□□ -0.62
Fv4P11370 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.15□□□□□ -0.62
Fv4P11370 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.15□□□□□ -0.62
Fv4P11370 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Fv4P11370 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Fv4P11370 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fv4P11370 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Fv4P11370 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Fv4P11370 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Fv4P11370 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Fv4P11370 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Fv4P11370 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Fv4P11370 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms