Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.91□□□□□ -0.02
Hoxc9P09633 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.91□□□□□ -0.02
Hoxc9P09633 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Hoxc9P09633 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm7541-201ENSMUST00000118361 535 ntBASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm13019-201ENSMUST00000120000 276 ntBASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm14993-201ENSMUST00000121180 164 ntBASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm3828-201ENSMUST00000121817 257 ntBASIC14.91□□□□□ -0.02
Hoxc9P09633 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.91□□□□□ -0.02
Hoxc9P09633 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
Hoxc9P09633 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm24328-201ENSMUST00000175104 67 ntBASIC14.91□□□□□ -0.02
Hoxc9P09633 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm34379-201ENSMUST00000195036 290 ntBASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm5870-201ENSMUST00000196461 282 ntBASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm7902-201ENSMUST00000198842 947 ntBASIC14.91□□□□□ -0.02
Hoxc9P09633 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
Hoxc9P09633 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.9□□□□□ -0.02
Hoxc9P09633 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Hoxc9P09633 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Gm44106-201ENSMUST00000203153 1599 ntBASIC14.9□□□□□ -0.02
Hoxc9P09633 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hoxc9P09633 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Hoxc9P09633 Mir671-201ENSMUST00000102432 98 ntBASIC14.9□□□□□ -0.02
Hoxc9P09633 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.9□□□□□ -0.02
Hoxc9P09633 Gm14234-201ENSMUST00000119539 845 ntBASIC14.9□□□□□ -0.02
Hoxc9P09633 Gm15620-201ENSMUST00000122949 270 ntBASIC14.9□□□□□ -0.02
Hoxc9P09633 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC14.9□□□□□ -0.02
Hoxc9P09633 Mir6941-201ENSMUST00000184711 59 ntBASIC14.9□□□□□ -0.02
Hoxc9P09633 Gm43249-201ENSMUST00000200464 458 ntBASIC14.9□□□□□ -0.02
Hoxc9P09633 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC14.9□□□□□ -0.02
Hoxc9P09633 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Hoxc9P09633 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.9□□□□□ -0.02
Hoxc9P09633 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Hoxc9P09633 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc9P09633 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hoxc9P09633 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.89□□□□□ -0.03
Hoxc9P09633 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxc9P09633 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxc9P09633 Gm6158-201ENSMUST00000109467 904 ntBASIC14.89□□□□□ -0.03
Hoxc9P09633 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 Gm19013-201ENSMUST00000183895 1222 ntBASIC14.89□□□□□ -0.03
Hoxc9P09633 Gm19014-201ENSMUST00000184828 1189 ntBASIC14.89□□□□□ -0.03
Hoxc9P09633 Gm42433-201ENSMUST00000196806 940 ntBASIC14.89□□□□□ -0.03
Hoxc9P09633 Gm18035-201ENSMUST00000211962 589 ntBASIC14.89□□□□□ -0.03
Hoxc9P09633 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxc9P09633 Gm19640-201ENSMUST00000214849 464 ntBASIC14.89□□□□□ -0.03
Hoxc9P09633 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC14.89□□□□□ -0.03
Hoxc9P09633 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Hoxc9P09633 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Hoxc9P09633 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc9P09633 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms