Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC8.35□□□□□ -1.07
TtrP07309 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.35□□□□□ -1.07
TtrP07309 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
TtrP07309 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC8.35□□□□□ -1.07
TtrP07309 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC8.35□□□□□ -1.07
TtrP07309 AC123857.2-201ENSMUST00000225756 1582 ntBASIC8.35□□□□□ -1.07
TtrP07309 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TtrP07309 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC8.34□□□□□ -1.07
TtrP07309 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Gm10829-201ENSMUST00000202084 2988 ntBASIC8.34□□□□□ -1.07
TtrP07309 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Gm7841-201ENSMUST00000122108 1629 ntBASIC8.34□□□□□ -1.07
TtrP07309 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC8.34□□□□□ -1.07
TtrP07309 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC8.34□□□□□ -1.07
TtrP07309 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC8.34□□□□□ -1.07
TtrP07309 Mir1247-201ENSMUST00000116706 82 ntBASIC8.34□□□□□ -1.07
TtrP07309 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Gm11478-201ENSMUST00000117851 599 ntBASIC8.34□□□□□ -1.07
TtrP07309 Gm11960-201ENSMUST00000122068 925 ntBASIC8.34□□□□□ -1.07
TtrP07309 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC8.34□□□□□ -1.07
TtrP07309 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.34□□□□□ -1.07
TtrP07309 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC8.34□□□□□ -1.07
TtrP07309 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
TtrP07309 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC8.34□□□□□ -1.07
TtrP07309 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
TtrP07309 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
TtrP07309 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
TtrP07309 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC8.34□□□□□ -1.07
TtrP07309 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TtrP07309 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
TtrP07309 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
TtrP07309 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
TtrP07309 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.08
TtrP07309 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
TtrP07309 Gm43375-201ENSMUST00000196705 2480 ntBASIC8.34□□□□□ -1.08
TtrP07309 Gm37613-201ENSMUST00000195677 3580 ntBASIC8.33□□□□□ -1.08
TtrP07309 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TtrP07309 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
TtrP07309 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TtrP07309 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TtrP07309 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC8.33□□□□□ -1.08
TtrP07309 Gm19221-201ENSMUST00000221827 1477 ntBASIC8.33□□□□□ -1.08
TtrP07309 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TtrP07309 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms