Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Gm44755-201ENSMUST00000207830 2102 ntBASIC8.44□□□□□ -1.06
TcraP01849 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
TcraP01849 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC8.43□□□□□ -1.06
TcraP01849 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 AC207128.2-201ENSMUST00000223708 1924 ntBASIC8.43□□□□□ -1.06
TcraP01849 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC8.43□□□□□ -1.06
TcraP01849 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Gm23912-201ENSMUST00000104687 87 ntBASIC8.43□□□□□ -1.06
TcraP01849 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC8.43□□□□□ -1.06
TcraP01849 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC8.43□□□□□ -1.06
TcraP01849 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC8.43□□□□□ -1.06
TcraP01849 Gm11964-201ENSMUST00000120982 444 ntBASIC8.43□□□□□ -1.06
TcraP01849 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC8.43□□□□□ -1.06
TcraP01849 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC8.43□□□□□ -1.06
TcraP01849 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Gm38230-201ENSMUST00000193572 1159 ntBASIC8.43□□□□□ -1.06
TcraP01849 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC8.43□□□□□ -1.06
TcraP01849 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC8.43□□□□□ -1.06
TcraP01849 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TcraP01849 Gm6091-201ENSMUST00000098307 165 ntBASIC8.43□□□□□ -1.06
TcraP01849 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC8.43□□□□□ -1.06
TcraP01849 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
TcraP01849 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
TcraP01849 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Gm8146-201ENSMUST00000192106 1847 ntBASIC8.43□□□□□ -1.06
TcraP01849 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TcraP01849 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
TcraP01849 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
TcraP01849 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Bcl2-202ENSMUST00000189999 2841 ntBASIC8.42□□□□□ -1.06
TcraP01849 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Gm2606-201ENSMUST00000100754 1002 ntBASIC8.42□□□□□ -1.06
TcraP01849 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
TcraP01849 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
TcraP01849 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
TcraP01849 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.42□□□□□ -1.06
TcraP01849 Gm12286-201ENSMUST00000119246 1002 ntBASIC8.42□□□□□ -1.06
TcraP01849 Gm13315-201ENSMUST00000120376 991 ntBASIC8.42□□□□□ -1.06
TcraP01849 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC8.42□□□□□ -1.06
TcraP01849 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC8.42□□□□□ -1.06
TcraP01849 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC8.42□□□□□ -1.06
TcraP01849 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC8.42□□□□□ -1.06
TcraP01849 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
TcraP01849 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
TcraP01849 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC8.42□□□□□ -1.06
TcraP01849 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TcraP01849 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms