Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Gm38145-201ENSMUST00000192319 693 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm40332-201ENSMUST00000199847 938 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm44605-201ENSMUST00000206892 949 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm6859-201ENSMUST00000218614 989 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 AC121567.1-201ENSMUST00000227213 842 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm38246-201ENSMUST00000194318 1511 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm15373-201ENSMUST00000121495 214 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm43163-201ENSMUST00000196571 442 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm31274-201ENSMUST00000197356 229 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm18621-201ENSMUST00000222677 679 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 AC102847.1-202ENSMUST00000226313 1245 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm8873-201ENSMUST00000217847 1439 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp9yF8VPU6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9.19□□□□□ -0.94
Usp9yF8VPU6 Gm6441-201ENSMUST00000120983 696 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm17221-201ENSMUST00000163909 481 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm17073-201ENSMUST00000168069 556 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm7741-201ENSMUST00000181445 989 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm30946-201ENSMUST00000198288 724 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm4903-201ENSMUST00000210462 405 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Gm5996-201ENSMUST00000211110 718 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Capsl-202ENSMUST00000226688 739 ntBASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp9yF8VPU6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms