Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cpsf4lE9Q2N0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cpsf4lE9Q2N0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm7666-201ENSMUST00000146631 819 ntBASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm18367-201ENSMUST00000176139 600 ntBASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm44008-201ENSMUST00000204345 412 ntBASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cpsf4lE9Q2N0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Gm12247-201ENSMUST00000117585 670 ntBASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.76□□□□□ -0.85
Cpsf4lE9Q2N0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms