Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Gm45186-201ENSMUST00000206874 478 ntBASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.72□□□□□ -0.37
Trim30cD3YVI9 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim30cD3YVI9 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Gm18212-201ENSMUST00000211678 889 ntBASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim30cD3YVI9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim30cD3YVI9 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Gm11989-201ENSMUST00000117240 672 ntBASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Gm13996-201ENSMUST00000118456 430 ntBASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Gm11362-201ENSMUST00000118838 850 ntBASIC12.7□□□□□ -0.38
Trim30cD3YVI9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Gm12997-201ENSMUST00000120207 640 ntBASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Gm2260-201ENSMUST00000184965 657 ntBASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim30cD3YVI9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms