Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb2S4R1M3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb2S4R1M3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.44■□□□□ 0.86
H2afb2S4R1M3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb2S4R1M3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.42■□□□□ 0.86
H2afb2S4R1M3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb2S4R1M3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb2S4R1M3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
H2afb2S4R1M3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.42■□□□□ 0.86
H2afb2S4R1M3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb2S4R1M3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb2S4R1M3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.42■□□□□ 0.86
H2afb2S4R1M3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb2S4R1M3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.41■□□□□ 0.86
H2afb2S4R1M3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb2S4R1M3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb2S4R1M3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb2S4R1M3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb2S4R1M3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
H2afb2S4R1M3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb2S4R1M3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
H2afb2S4R1M3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb2S4R1M3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
H2afb2S4R1M3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb2S4R1M3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb2S4R1M3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb2S4R1M3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb2S4R1M3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb2S4R1M3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
H2afb2S4R1M3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
H2afb2S4R1M3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
H2afb2S4R1M3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
H2afb2S4R1M3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2afb2S4R1M3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2afb2S4R1M3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2afb2S4R1M3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2afb2S4R1M3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2afb2S4R1M3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb2S4R1M3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb2S4R1M3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb2S4R1M3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb2S4R1M3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb2S4R1M3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb2S4R1M3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
H2afb2S4R1M3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb2S4R1M3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb2S4R1M3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.38■□□□□ 0.85
H2afb2S4R1M3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb2S4R1M3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms