Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcb1Q9Z0H3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcb1Q9Z0H3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Smarcb1Q9Z0H3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smarcb1Q9Z0H3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcb1Q9Z0H3 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.28■■□□□ 1
Smarcb1Q9Z0H3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.28■■□□□ 1
Smarcb1Q9Z0H3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Smarcb1Q9Z0H3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcb1Q9Z0H3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smarcb1Q9Z0H3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcb1Q9Z0H3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smarcb1Q9Z0H3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcb1Q9Z0H3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcb1Q9Z0H3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.26■□□□□ 0.99
Smarcb1Q9Z0H3 Gm8493-201ENSMUST00000196881 489 ntBASIC21.26■□□□□ 0.99
Smarcb1Q9Z0H3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcb1Q9Z0H3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.25■□□□□ 0.99
Smarcb1Q9Z0H3 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcb1Q9Z0H3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcb1Q9Z0H3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcb1Q9Z0H3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcb1Q9Z0H3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Smarcb1Q9Z0H3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcb1Q9Z0H3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcb1Q9Z0H3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcb1Q9Z0H3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcb1Q9Z0H3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcb1Q9Z0H3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcb1Q9Z0H3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcb1Q9Z0H3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcb1Q9Z0H3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcb1Q9Z0H3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcb1Q9Z0H3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcb1Q9Z0H3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcb1Q9Z0H3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.2■□□□□ 0.98
Smarcb1Q9Z0H3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Smarcb1Q9Z0H3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Smarcb1Q9Z0H3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcb1Q9Z0H3 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.2■□□□□ 0.98
Smarcb1Q9Z0H3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcb1Q9Z0H3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcb1Q9Z0H3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcb1Q9Z0H3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcb1Q9Z0H3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcb1Q9Z0H3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcb1Q9Z0H3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.19■□□□□ 0.98
Smarcb1Q9Z0H3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcb1Q9Z0H3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Spcs1-204ENSMUST00000226782 949 ntBASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcb1Q9Z0H3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms