Protein–RNA interactions for Protein: Q9WU78

Pdcd6ip, Programmed cell death 6-interacting protein, mousemouse

Known RBP Predictions only

Length 869 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdcd6ipQ9WU78 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdcd6ipQ9WU78 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdcd6ipQ9WU78 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
Pdcd6ipQ9WU78 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pdcd6ipQ9WU78 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdcd6ipQ9WU78 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pdcd6ipQ9WU78 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pdcd6ipQ9WU78 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pdcd6ipQ9WU78 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pdcd6ipQ9WU78 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.7■■□□□ 1.38
Pdcd6ipQ9WU78 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Pdcd6ipQ9WU78 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pdcd6ipQ9WU78 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pdcd6ipQ9WU78 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pdcd6ipQ9WU78 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.7■■□□□ 1.38
Pdcd6ipQ9WU78 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdcd6ipQ9WU78 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.68■■□□□ 1.38
Pdcd6ipQ9WU78 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.68■■□□□ 1.38
Pdcd6ipQ9WU78 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdcd6ipQ9WU78 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Pdcd6ipQ9WU78 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.68■■□□□ 1.38
Pdcd6ipQ9WU78 Gm43017-201ENSMUST00000198296 752 ntBASIC23.68■■□□□ 1.38
Pdcd6ipQ9WU78 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.68■■□□□ 1.38
Pdcd6ipQ9WU78 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.68■■□□□ 1.38
Pdcd6ipQ9WU78 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.68■■□□□ 1.38
Pdcd6ipQ9WU78 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdcd6ipQ9WU78 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pdcd6ipQ9WU78 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdcd6ipQ9WU78 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdcd6ipQ9WU78 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pdcd6ipQ9WU78 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pdcd6ipQ9WU78 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdcd6ipQ9WU78 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdcd6ipQ9WU78 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.66■■□□□ 1.38
Pdcd6ipQ9WU78 Gm8493-201ENSMUST00000196881 489 ntBASIC23.66■■□□□ 1.38
Pdcd6ipQ9WU78 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdcd6ipQ9WU78 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdcd6ipQ9WU78 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pdcd6ipQ9WU78 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdcd6ipQ9WU78 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pdcd6ipQ9WU78 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdcd6ipQ9WU78 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pdcd6ipQ9WU78 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pdcd6ipQ9WU78 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pdcd6ipQ9WU78 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pdcd6ipQ9WU78 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.64■■□□□ 1.37
Pdcd6ipQ9WU78 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pdcd6ipQ9WU78 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pdcd6ipQ9WU78 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pdcd6ipQ9WU78 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
Pdcd6ipQ9WU78 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pdcd6ipQ9WU78 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pdcd6ipQ9WU78 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pdcd6ipQ9WU78 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.62■■□□□ 1.37
Pdcd6ipQ9WU78 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.62■■□□□ 1.37
Pdcd6ipQ9WU78 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.62■■□□□ 1.37
Pdcd6ipQ9WU78 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.62■■□□□ 1.37
Pdcd6ipQ9WU78 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pdcd6ipQ9WU78 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pdcd6ipQ9WU78 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pdcd6ipQ9WU78 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pdcd6ipQ9WU78 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms