Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.97■□□□□ 0.95
Rfwd2Q9R1A8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rfwd2Q9R1A8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfwd2Q9R1A8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfwd2Q9R1A8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rfwd2Q9R1A8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd2Q9R1A8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd2Q9R1A8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd2Q9R1A8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd2Q9R1A8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd2Q9R1A8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd2Q9R1A8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.95■□□□□ 0.94
Rfwd2Q9R1A8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rfwd2Q9R1A8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rfwd2Q9R1A8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd2Q9R1A8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfwd2Q9R1A8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfwd2Q9R1A8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.94■□□□□ 0.94
Rfwd2Q9R1A8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfwd2Q9R1A8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfwd2Q9R1A8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfwd2Q9R1A8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfwd2Q9R1A8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.94■□□□□ 0.94
Rfwd2Q9R1A8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfwd2Q9R1A8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Rfwd2Q9R1A8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfwd2Q9R1A8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfwd2Q9R1A8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd2Q9R1A8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd2Q9R1A8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd2Q9R1A8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd2Q9R1A8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfwd2Q9R1A8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rfwd2Q9R1A8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rfwd2Q9R1A8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.9■□□□□ 0.94
Rfwd2Q9R1A8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rfwd2Q9R1A8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rfwd2Q9R1A8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfwd2Q9R1A8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfwd2Q9R1A8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfwd2Q9R1A8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfwd2Q9R1A8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rfwd2Q9R1A8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfwd2Q9R1A8 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.89■□□□□ 0.93
Rfwd2Q9R1A8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rfwd2Q9R1A8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rfwd2Q9R1A8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfwd2Q9R1A8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfwd2Q9R1A8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rfwd2Q9R1A8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfwd2Q9R1A8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rfwd2Q9R1A8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd2Q9R1A8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms