Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.74■□□□□ 0.59
Htra1Q9R118 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.74■□□□□ 0.59
Htra1Q9R118 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.74■□□□□ 0.59
Htra1Q9R118 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Htra1Q9R118 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Htra1Q9R118 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Htra1Q9R118 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.73■□□□□ 0.59
Htra1Q9R118 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Htra1Q9R118 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Htra1Q9R118 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Htra1Q9R118 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.72■□□□□ 0.59
Htra1Q9R118 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.72■□□□□ 0.59
Htra1Q9R118 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Htra1Q9R118 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Htra1Q9R118 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Htra1Q9R118 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Htra1Q9R118 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Htra1Q9R118 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Htra1Q9R118 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Htra1Q9R118 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.71■□□□□ 0.58
Htra1Q9R118 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Htra1Q9R118 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Htra1Q9R118 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Htra1Q9R118 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Htra1Q9R118 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.7■□□□□ 0.58
Htra1Q9R118 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.7■□□□□ 0.58
Htra1Q9R118 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Htra1Q9R118 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Htra1Q9R118 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.69■□□□□ 0.58
Htra1Q9R118 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Htra1Q9R118 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Htra1Q9R118 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Htra1Q9R118 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.69■□□□□ 0.58
Htra1Q9R118 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Htra1Q9R118 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Htra1Q9R118 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Htra1Q9R118 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.68■□□□□ 0.58
Htra1Q9R118 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Htra1Q9R118 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Htra1Q9R118 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Htra1Q9R118 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Htra1Q9R118 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Htra1Q9R118 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Htra1Q9R118 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Htra1Q9R118 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Htra1Q9R118 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Htra1Q9R118 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Htra1Q9R118 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Htra1Q9R118 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Htra1Q9R118 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Htra1Q9R118 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Htra1Q9R118 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.66■□□□□ 0.58
Htra1Q9R118 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Htra1Q9R118 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.66■□□□□ 0.58
Htra1Q9R118 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Htra1Q9R118 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Htra1Q9R118 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Htra1Q9R118 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Htra1Q9R118 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Htra1Q9R118 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Htra1Q9R118 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Htra1Q9R118 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Htra1Q9R118 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Htra1Q9R118 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Htra1Q9R118 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Htra1Q9R118 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Htra1Q9R118 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Htra1Q9R118 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Htra1Q9R118 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Htra1Q9R118 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Htra1Q9R118 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Htra1Q9R118 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Htra1Q9R118 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Htra1Q9R118 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Htra1Q9R118 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Htra1Q9R118 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Htra1Q9R118 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Htra1Q9R118 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Htra1Q9R118 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Htra1Q9R118 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Htra1Q9R118 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Htra1Q9R118 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Htra1Q9R118 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Htra1Q9R118 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Htra1Q9R118 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms