Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm12821-201ENSMUST00000120022 600 ntBASIC20.57■□□□□ 0.88
Shroom3Q9QXN0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.57■□□□□ 0.88
Shroom3Q9QXN0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom3Q9QXN0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.57■□□□□ 0.88
Shroom3Q9QXN0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom3Q9QXN0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shroom3Q9QXN0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shroom3Q9QXN0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom3Q9QXN0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.54■□□□□ 0.88
Shroom3Q9QXN0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Shroom3Q9QXN0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.54■□□□□ 0.88
Shroom3Q9QXN0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Shroom3Q9QXN0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.54■□□□□ 0.88
Shroom3Q9QXN0 Golgb1-201ENSMUST00000023534 498 ntBASIC20.54■□□□□ 0.88
Shroom3Q9QXN0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Shroom3Q9QXN0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom3Q9QXN0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom3Q9QXN0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Shroom3Q9QXN0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom3Q9QXN0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom3Q9QXN0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom3Q9QXN0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.53■□□□□ 0.88
Shroom3Q9QXN0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom3Q9QXN0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom3Q9QXN0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom3Q9QXN0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom3Q9QXN0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom3Q9QXN0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom3Q9QXN0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom3Q9QXN0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Shroom3Q9QXN0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Shroom3Q9QXN0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shroom3Q9QXN0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom3Q9QXN0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom3Q9QXN0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom3Q9QXN0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom3Q9QXN0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom3Q9QXN0 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.49■□□□□ 0.87
Shroom3Q9QXN0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Shroom3Q9QXN0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom3Q9QXN0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom3Q9QXN0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.48■□□□□ 0.87
Shroom3Q9QXN0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom3Q9QXN0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom3Q9QXN0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Shroom3Q9QXN0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom3Q9QXN0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom3Q9QXN0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom3Q9QXN0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Shroom3Q9QXN0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom3Q9QXN0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom3Q9QXN0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom3Q9QXN0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Shroom3Q9QXN0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Shroom3Q9QXN0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Shroom3Q9QXN0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom3Q9QXN0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms